Index

_

_cnt() (pyfiber.behavior.MultiBehavior method) (pyfiber.MultiBehavior method) _compute_attributes() (pyfiber.behavior.Behavior method) _config_path (pyfiber._utils.PyFiber attribute) _create_imetronic_attributes() (pyfiber.behavior.Behavior method) _debug_interinj() (pyfiber.behavior.Behavior method) _detect_peaks() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) _extract() (pyfiber.behavior.Behavior method) _extract_data() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) _find_rec() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) _getID() (pyfiber.analysis.MultiSession method) (pyfiber.MultiSession method) _graph() (pyfiber.behavior.Behavior method) _help (pyfiber._utils.PyFiber property) _import_folder() (pyfiber.analysis.MultiSession method) (pyfiber.MultiSession method)

_internal_selection() (pyfiber.behavior.Behavior method) _list() (pyfiber._utils.PyFiber method) _possible_data() (pyfiber.Analysis method) (pyfiber.analysis.Analysis method) _print() (pyfiber._utils.PyFiber method) _read_file() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) _recorded_timestamps() (pyfiber.analysis.Session method) (pyfiber.Session method) _sample() (pyfiber.analysis.Session method) (pyfiber.Session method) _sample_config (pyfiber._utils.PyFiber attribute) _savgol() (pyfiber._utils.PyFiber method) (pyfiber.Analysis method) (pyfiber.analysis.Analysis method) (pyfiber.behavior.MultiBehavior method) (pyfiber.MultiBehavior method) _split_recordings() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) _translate() (pyfiber.behavior.Behavior method)

A

Analysis (class in pyfiber) (class in pyfiber.analysis) analyze() (pyfiber.analysis.MultiSession method) (pyfiber.analysis.Session method) (pyfiber.MultiSession method) (pyfiber.Session method)

B

basic_intervals (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.behavior.Behavior attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) Behavior (class in pyfiber) (class in pyfiber.behavior) BEHAVIOR (pyfiber._utils.PyFiber attribute) BEHAVIOR_FILE_TYPE (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.behavior.Behavior attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

behavior_time_ratio (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.behavior.Behavior attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

C

CFG (pyfiber._utils.PyFiber attribute) compare_behavior() (pyfiber.analysis.MultiSession method) (pyfiber.MultiSession method) count() (pyfiber.behavior.MultiBehavior method) (pyfiber.MultiBehavior method) csv_events (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.behavior.Behavior attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

cumul() (pyfiber.behavior.MultiBehavior method) (pyfiber.MultiBehavior method) custom (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.behavior.Behavior attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

D

data (pyfiber.analysis.MultiAnalysis property) (pyfiber.Behavior property) (pyfiber.behavior.Behavior property) (pyfiber.MultiAnalysis property) default_norm (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

description (pyfiber.behavior.Behavior property) DORIC_CSV (pyfiber._utils.PyFiber attribute) DORIC_HDF (pyfiber._utils.PyFiber attribute)

E

element_of() (in module pyfiber.behavior) elements (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.behavior.Behavior attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) Events (in module pyfiber._utils) (in module pyfiber.behavior)

events() (pyfiber.analysis.Session method) (pyfiber.Behavior method) (pyfiber.behavior.Behavior method) (pyfiber.Session method) EXAMPLE_NOMENCLATURE (pyfiber._utils.PyFiber attribute) exclude() (pyfiber.analysis.MultiAnalysis method) (pyfiber.MultiAnalysis method) export_timestamps() (pyfiber.Behavior method) (pyfiber.behavior.Behavior method)

F

f (pyfiber._utils.PyFiber attribute) Fiber (class in pyfiber) (class in pyfiber.fiber) FIBER (pyfiber._utils.PyFiber attribute) FIBER_FILE_TYPE (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

figure() (pyfiber.Behavior method) (pyfiber.behavior.Behavior method) FOLDER (pyfiber._utils.PyFiber attribute) folder_nomenclature (pyfiber._utils.PyFiber attribute) from_folder() (pyfiber.analysis.Session class method) (pyfiber.Session class method) full_data (pyfiber.analysis.MultiAnalysis property) (pyfiber.MultiAnalysis property)

G

GENERAL (pyfiber._utils.PyFiber attribute) generate_interval() (in module pyfiber.behavior) get() (pyfiber.Behavior method) (pyfiber.behavior.Behavior method) (pyfiber.Fiber method) (pyfiber.fiber.Fiber method)

H

help (pyfiber._utils.PyFiber property)

I

ID (pyfiber._utils.PyFiber attribute) IMETRONIC (pyfiber._utils.PyFiber attribute) imetronic_events (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.behavior.Behavior attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

info (pyfiber._utils.PyFiber property) interval_is_close_to() (in module pyfiber.behavior) intervals() (pyfiber.analysis.Session method) (pyfiber.Behavior method) (pyfiber.behavior.Behavior method) (pyfiber.Session method)

L

log (pyfiber._utils.PyFiber property)

M

min_sample_per_rec (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) module pyfiber._utils pyfiber.analysis pyfiber.behavior pyfiber.fiber

movement() (pyfiber.Behavior method) (pyfiber.behavior.Behavior method) MultiAnalysis (class in pyfiber) (class in pyfiber.analysis) MultiBehavior (class in pyfiber) (class in pyfiber.behavior) MultiSession (class in pyfiber) (class in pyfiber.analysis)

N

norm() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method)

normalize_signal() (in module pyfiber.fiber)

P

peak_baseline_MAD (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) peak_distance (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) peak_peak_MAD (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) peak_window (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) peak_zscore (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

peakFA() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) perievent_window (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) plot() (pyfiber.Analysis method) (pyfiber.analysis.Analysis method) (pyfiber.analysis.MultiAnalysis method) (pyfiber.analysis.Session method) (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) (pyfiber.MultiAnalysis method) (pyfiber.Session method) plot_transients() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) possible_data() (pyfiber.analysis.MultiAnalysis method) (pyfiber.MultiAnalysis method) PyFiber (class in pyfiber._utils) pyfiber._utils module pyfiber.analysis module pyfiber.behavior module pyfiber.fiber module

R

raw (pyfiber.Behavior property) (pyfiber.behavior.Behavior property)

S

select_interval_by_duration() (in module pyfiber.behavior) Session (class in pyfiber) (class in pyfiber.analysis) set_non() (in module pyfiber.behavior) set_union() (in module pyfiber.behavior) show_rate() (pyfiber.behavior.MultiBehavior method) (pyfiber.MultiBehavior method) show_rates() (pyfiber.analysis.MultiSession method) (pyfiber.MultiSession method) smooth() (pyfiber.Analysis method) (pyfiber.analysis.Analysis method) split_recordings (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

split_treshold (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute) summary() (pyfiber.Behavior method) (pyfiber.behavior.Behavior method) (pyfiber.behavior.MultiBehavior method) (pyfiber.MultiBehavior method) SYSTEM (pyfiber._utils.PyFiber attribute)

T

timestamps() (pyfiber.Behavior method) (pyfiber.behavior.Behavior method) to_csv() (pyfiber.Fiber method) (pyfiber.fiber.Fiber method) total (pyfiber.Behavior property) (pyfiber.behavior.Behavior property) trim_recording (pyfiber.analysis.MultiAnalysis attribute) (pyfiber.analysis.MultiSession attribute) (pyfiber.analysis.Session attribute) (pyfiber.Fiber attribute) (pyfiber.fiber.Fiber attribute) (pyfiber.MultiAnalysis attribute) (pyfiber.MultiSession attribute) (pyfiber.Session attribute)

U

update() (pyfiber.analysis.MultiAnalysis method) (pyfiber.MultiAnalysis method)

update_window() (pyfiber.analysis.Session method) (pyfiber.Session method)

W

what_data() (pyfiber.Behavior method) (pyfiber.behavior.Behavior method)